complexheatmap

We have hosted the application complexheatmap in order to run this application in our online workstations with Wine or directly.

Quick description about complexheatmap:

ComplexHeatmap is an R/Bioconductor package by Zuguang Gu et al. designed to create highly flexible, complex, richly annotated heatmaps and related visualizations. It allows arranging multiple heatmaps, adding annotations, combining heatmaps, customizing colors, layouts, and integrating other plots. Often used in genomics/bioinformatics to show expression, methylation, etc., with sidebars, annotations, clustering, etc.

Features:

• ComplexHeatmap is an R/Bioconductor package by Zuguang Gu et al. designed to create highly flexible, complex, richly annotated heatmaps and related visualizations. It allows arranging multiple heatmaps, adding annotations, combining heatmaps, customizing colors, layouts, and integrating other plots. Often used in genomics/bioinformatics to show expression, methylation, etc., with side bars, annotations, clustering, etc.
• Highly customizable layout: combining different heatmaps, arranging splitting, dealing with multiple heatmap merge, combining with other plots etc.
• Support for rich annotation graphics: bar plots, boxplots, images, heatmap cell clustering, etc.
• Rasterization / optimization for large heatmaps for performance and memory management
• Integration with Shiny / interactive heatmaps via companion packages (InteractiveComplexHeatmap) to allow interactivity etc.
• Vignettes / extensive documentation & examples; support from Bioconductor distribution making installation & updates manageable.

Programming Language: R.
Categories: